adegenet: adegenet: an R package for the exploratory analysis of genetic and genomic data

Classes and functions for genetic data analysis within the multivariate framework.

Version: 1.3-4
Depends: R (≥ 2.10), methods, MASS, ade4
Suggests: genetics, spdep, tripack, ape, pegas, seqinr, adehabitat, multicore, akima, maps, splancs
Published: 2012-01-18
Author: Thibaut Jombart with contributions of: Ismail Ahmed, Peter Solymos and contributed datasets from: Katayoun Moazami-Goudarzi, Denis Laloe, Dominique Pontier, Daniel Maillard, Francois Balloux
Maintainer: Thibaut Jombart <t.jombart at imperial.ac.uk>
License: GPL (≥ 2)
Citation: adegenet citation info
In views: Genetics
CRAN checks: adegenet results

Downloads:

Package source: adegenet_1.3-4.tar.gz
MacOS X binary: adegenet_1.3-4.tgz
Windows binary: adegenet_1.3-4.zip
Reference manual: adegenet.pdf
Vignettes: An introduction to the adegenet package
An introduction to Discriminant Analysis of Principal Components (DAPC)
Analysing genome-wide SNP data using adegenet
A tutorial for spatial Analysis of Principal Components
News/ChangeLog:ChangeLog
Old sources: adegenet archive

Reverse dependencies:

Reverse depends: mmod, pegas
Reverse suggests: hierfstat, polysat
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